orthGS: Orthology vs Paralogy Relationships among Glutamine Synthetase from Plants

Tools to analyze and infer orthology and paralogy relationships between glutamine synthetase proteins in seed plants.

Version: 0.1.5
Depends: R (≥ 2.10)
Imports: ape, bio3d, castor, igraph, phangorn, phytools, seqinr, TreeTools
Suggests: BiocManager, Biostrings, fs, knitr, muscle, rmarkdown, testthat
Published: 2024-09-17
DOI: 10.32614/CRAN.package.orthGS
Author: Elena Aledo [aut, cre, cph], Juan-Carlos Aledo ORCID iD [aut]
Maintainer: Elena Aledo <elenaaledoesteban at gmail.com>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
Materials: README
CRAN checks: orthGS results

Documentation:

Reference manual: orthGS.pdf
Vignettes: Searching_for_Orthologous (source, R code)
Unraveling the Hiden Paralogous (source, R code)

Downloads:

Package source: orthGS_0.1.5.tar.gz
Windows binaries: r-devel: orthGS_0.1.5.zip, r-release: orthGS_0.1.5.zip, r-oldrel: orthGS_0.1.5.zip
macOS binaries: r-release (arm64): orthGS_0.1.5.tgz, r-oldrel (arm64): orthGS_0.1.5.tgz, r-release (x86_64): orthGS_0.1.5.tgz, r-oldrel (x86_64): orthGS_0.1.5.tgz

Linking:

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