Last updated on 2024-11-22 03:52:52 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.2.6 | 67.00 | 384.58 | 451.58 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.2.6 | 39.70 | 264.73 | 304.43 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.2.6 | 597.48 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.2.6 | 706.02 | ERROR | |||
| r-devel-windows-x86_64 | 0.2.6 | 50.00 | 297.00 | 347.00 | ERROR | |
| r-patched-linux-x86_64 | 0.2.6 | 62.06 | 370.83 | 432.89 | ERROR | |
| r-release-linux-x86_64 | 0.2.6 | 57.45 | 369.72 | 427.17 | ERROR | |
| r-release-macos-arm64 | 0.2.6 | 245.00 | OK | |||
| r-release-macos-x86_64 | 0.2.6 | 285.00 | OK | |||
| r-release-windows-x86_64 | 0.2.6 | 49.00 | 293.00 | 342.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.2.6 | 151.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.2.6 | 292.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.2.6 | 69.00 | 389.00 | 458.00 | ERROR |
Version: 0.2.6
Check: dependencies in R code
Result: NOTE
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.2.6
Check: S3 generic/method consistency
Result: WARN
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
See section ‘Generic functions and methods’ in the ‘Writing R
Extensions’ manual.
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.2.6
Check: replacement functions
Result: WARN
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
The argument of a replacement function which corresponds to the right
hand side must be named ‘value’.
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.2.6
Check: foreign function calls
Result: NOTE
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
See chapter ‘System and foreign language interfaces’ in the ‘Writing R
Extensions’ manual.
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.2.6
Check: R code for possible problems
Result: NOTE
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.2.6
Check: for missing documentation entries
Result: WARN
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
All user-level objects in a package should have documentation entries.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.2.6
Check: for code/documentation mismatches
Result: WARN
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.2.6
Check: Rd \usage sections
Result: NOTE
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.2.6
Check: examples
Result: ERROR
Running examples in ‘soilassessment-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: depthharm
> ### Title: A function for harmonizing soil property between uniform depth
> ### intervals in observation pits
> ### Aliases: depthharm
>
> ### ** Examples
>
> library(aqp)
This is aqp 2.1.0
> library(plyr)
> library(sp)
Attaching package: ‘sp’
The following objects are masked from ‘package:aqp’:
coordinates, coordinates<-, proj4string, proj4string<-
> x=c(rep(2.12,4),rep(2.05,4))
> y=c(rep(9.34,4),rep(8.17,4))
> pit=c(rep(1,4),rep(2,4))
> depthcode=c(1,2,3,4,1,2,3,4)
> upper=c(0,18,25,35,0,12,33,50)
> lower=c(10,25,35,67,12,33,50,100)
> pH=c(6.7,5.5,5.1,6.7,6.4,5.8,5.3,5.0)
> df=data.frame(pit,x,y,upper,lower,depthcode,pH)
> lat=df$x;lon=df$y;id=df$pit;top=df$upper;
> bottom=df$lower;horizon=df$depthcode;Varn=df$pH
>
> soildata <- join(data.frame(id, top, bottom, Varn, horizon),
+ data.frame(id, lat, lon), type='inner')
Joining by: id
> depths(soildata) <- id ~ top + bottom
> site(soildata) <- ~ lat + lon
> coordinates(soildata) <- ~ lat + lon
Error: unable to find an inherited method for function ‘coordinates<-’ for signature ‘object = "SoilProfileCollection"’
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 0.2.6
Check: examples
Result: ERROR
Running examples in ‘soilassessment-Ex.R’ failed
The error most likely occurred in:
> ### Name: depthharm
> ### Title: A function for harmonizing soil property between uniform depth
> ### intervals in observation pits
> ### Aliases: depthharm
>
> ### ** Examples
>
> library(aqp)
This is aqp 2.1.0
> library(plyr)
> library(sp)
Attaching package: ‘sp’
The following objects are masked from ‘package:aqp’:
coordinates, coordinates<-, proj4string, proj4string<-
> x=c(rep(2.12,4),rep(2.05,4))
> y=c(rep(9.34,4),rep(8.17,4))
> pit=c(rep(1,4),rep(2,4))
> depthcode=c(1,2,3,4,1,2,3,4)
> upper=c(0,18,25,35,0,12,33,50)
> lower=c(10,25,35,67,12,33,50,100)
> pH=c(6.7,5.5,5.1,6.7,6.4,5.8,5.3,5.0)
> df=data.frame(pit,x,y,upper,lower,depthcode,pH)
> lat=df$x;lon=df$y;id=df$pit;top=df$upper;
> bottom=df$lower;horizon=df$depthcode;Varn=df$pH
>
> soildata <- join(data.frame(id, top, bottom, Varn, horizon),
+ data.frame(id, lat, lon), type='inner')
Joining by: id
> depths(soildata) <- id ~ top + bottom
> site(soildata) <- ~ lat + lon
> coordinates(soildata) <- ~ lat + lon
Error: unable to find an inherited method for function ‘coordinates<-’ for signature ‘object = "SoilProfileCollection"’
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-release-windows-x86_64
Version: 0.2.6
Check: examples
Result: ERROR
Running examples in 'soilassessment-Ex.R' failed
The error most likely occurred in:
> ### Name: depthharm
> ### Title: A function for harmonizing soil property between uniform depth
> ### intervals in observation pits
> ### Aliases: depthharm
>
> ### ** Examples
>
> library(aqp)
This is aqp 2.1.0
> library(plyr)
> library(sp)
Attaching package: 'sp'
The following objects are masked from 'package:aqp':
coordinates, coordinates<-, proj4string, proj4string<-
> x=c(rep(2.12,4),rep(2.05,4))
> y=c(rep(9.34,4),rep(8.17,4))
> pit=c(rep(1,4),rep(2,4))
> depthcode=c(1,2,3,4,1,2,3,4)
> upper=c(0,18,25,35,0,12,33,50)
> lower=c(10,25,35,67,12,33,50,100)
> pH=c(6.7,5.5,5.1,6.7,6.4,5.8,5.3,5.0)
> df=data.frame(pit,x,y,upper,lower,depthcode,pH)
> lat=df$x;lon=df$y;id=df$pit;top=df$upper;
> bottom=df$lower;horizon=df$depthcode;Varn=df$pH
>
> soildata <- join(data.frame(id, top, bottom, Varn, horizon),
+ data.frame(id, lat, lon), type='inner')
Joining by: id
> depths(soildata) <- id ~ top + bottom
> site(soildata) <- ~ lat + lon
> coordinates(soildata) <- ~ lat + lon
Error in (function (classes, fdef, mtable) :
unable to find an inherited method for function 'coordinates<-' for signature '"SoilProfileCollection"'
Calls: coordinates<- -> <Anonymous>
Execution halted
Flavor: r-oldrel-windows-x86_64