CRAN Package Check Results for Package gamlss.foreach

Last updated on 2024-12-22 03:49:51 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1-6 7.61 71.89 79.50 NOTE
r-devel-linux-x86_64-debian-gcc 1.1-6 5.64 55.51 61.15 NOTE
r-devel-linux-x86_64-fedora-clang 1.1-6 127.18 NOTE
r-devel-linux-x86_64-fedora-gcc 1.1-6 120.82 NOTE
r-devel-windows-x86_64 1.1-6 10.00 89.00 99.00 NOTE
r-patched-linux-x86_64 1.1-6 8.25 68.56 76.81 NOTE
r-release-linux-x86_64 1.1-6 7.46 65.48 72.94 ERROR
r-release-macos-arm64 1.1-6 38.00 NOTE
r-release-macos-x86_64 1.1-6 55.00 NOTE
r-release-windows-x86_64 1.1-6 9.00 99.00 108.00 NOTE
r-oldrel-macos-arm64 1.1-6 39.00 OK
r-oldrel-macos-x86_64 1.1-6 64.00 OK
r-oldrel-windows-x86_64 1.1-6 12.00 105.00 117.00 OK

Check Details

Version: 1.1-6
Check: Rd files
Result: NOTE checkRd: (-1) pc.Rd:17: Lost braces 17 | The functions \code{gamlss.pcr()} and \code{gamlss.pc()} are supporting functions. The are not intended to be called directly by users. The function \code{gamlss.pc()} is using the linear model function \code{lm()} to fit the first principal components while the function code{gamlss.pcr()} uses \code{fitPCR()}. | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64

Version: 1.1-6
Check: examples
Result: ERROR Running examples in ‘gamlss.foreach-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: BayesianBoot > ### Title: Non parametric and Bayesian Bootstrapping for GAMLSS models > ### Aliases: BayesianBoot NonParametricBoot > ### Keywords: regression > > ### ** Examples > > m1 <-gamlss(y~x+qrt, data=aids, family=NBI()) GAMLSS-RS iteration 1: Global Deviance = 492.7119 GAMLSS-RS iteration 2: Global Deviance = 492.6375 GAMLSS-RS iteration 3: Global Deviance = 492.6373 > registerDoParallel(cores = 2) > B1 <- BayesianBoot(m1) > summary(B1) Coefficients from Baysian.boot() taken from: 100 simulations mean 2.5% 50% 97.5% mle mu.(Intercept) 2.846916 2.246342 2.837857 3.303062 2.8855 mu.x 0.088560 0.073642 0.087903 0.104506 0.0874 mu.qrt2 -0.093034 -0.407518 -0.114519 0.261665 -0.1204 mu.qrt3 0.146079 -0.267109 0.135111 0.528061 0.1118 mu.qrt4 -0.052182 -0.371294 -0.059259 0.295910 -0.0755 sigma.(Intercept) -1.744463 -2.192055 -1.746019 -1.282752 -1.6032 deviance 486.200439 454.531320 487.919005 513.738783 492.6373 > plot(B1) > B2 <- NonParametricBoot(m1) GAMLSS-RS iteration 1: Global Deviance = 477.2351 GAMLSS-RS iteration 2: Global Deviance = 477.0083 GAMLSS-RS iteration 1: Global Deviance = 505.8084 GAMLSS-RS iteration 2: Global Deviance = 505.7488 GAMLSS-RS iteration 3: Global Deviance = 477.0082 GAMLSS-RS iteration 3: Global Deviance = 505.7487 GAMLSS-RS iteration 1: Global Deviance = 501.4957 GAMLSS-RS iteration 2: Global Deviance = 501.4377 GAMLSS-RS iteration 3: Global Deviance = 501.4376 GAMLSS-RS iteration 1: Global Deviance = 505.3332 GAMLSS-RS iteration 2: Global Deviance = 505.1994 GAMLSS-RS iteration 3: Global Deviance = 505.199 GAMLSS-RS iteration 1: Global Deviance = 480.2604 GAMLSS-RS iteration 2: Global Deviance = 480.2049 GAMLSS-RS iteration 3: Global Deviance = 480.2048 GAMLSS-RS iteration 1: Global Deviance = 488.1693 GAMLSS-RS iteration 2: Global Deviance = 487.9005 GAMLSS-RS iteration 1: Global Deviance = 499.5451 GAMLSS-RS iteration 3: Global Deviance = 487.9 GAMLSS-RS iteration 2: Global Deviance = 499.4699 GAMLSS-RS iteration 1: Global Deviance = 506.9956 GAMLSS-RS iteration 3: Global Deviance = 499.4697 GAMLSS-RS iteration 2: Global Deviance = 506.9266 GAMLSS-RS iteration 3: Global Deviance = 506.9264 GAMLSS-RS iteration 1: Global Deviance = 491.4851 GAMLSS-RS iteration 2: Global Deviance = 491.4047 GAMLSS-RS iteration 3: Global Deviance = 491.4045 GAMLSS-RS iteration 1: Global Deviance = 470.0358 GAMLSS-RS iteration 1: Global Deviance = 505.0223 GAMLSS-RS iteration 2: Global Deviance = 504.9517 GAMLSS-RS iteration 2: Global Deviance = 469.8804 GAMLSS-RS iteration 3: Global Deviance = 504.9516 GAMLSS-RS iteration 3: Global Deviance = 469.8803 GAMLSS-RS iteration 1: Global Deviance = 481.3469 GAMLSS-RS iteration 2: Global Deviance = 481.2894 GAMLSS-RS iteration 3: Global Deviance = 481.2895 GAMLSS-RS iteration 1: Global Deviance = 449.3989 GAMLSS-RS iteration 1: Global Deviance = 475.281 GAMLSS-RS iteration 2: Global Deviance = 449.0419 GAMLSS-RS iteration 2: Global Deviance = 475.0872 GAMLSS-RS iteration 3: Global Deviance = 449.0415 GAMLSS-RS iteration 3: Global Deviance = 475.0871 GAMLSS-RS iteration 1: Global Deviance = 482.4184 GAMLSS-RS iteration 2: Global Deviance = 482.3447 GAMLSS-RS iteration 3: Global Deviance = 482.3446 GAMLSS-RS iteration 1: Global Deviance = 474.1705 GAMLSS-RS iteration 2: Global Deviance = 474.0184 GAMLSS-RS iteration 1: Global Deviance = 457.2658 GAMLSS-RS iteration 3: Global Deviance = 474.0184 GAMLSS-RS iteration 2: Global Deviance = 457.1158 GAMLSS-RS iteration 3: Global Deviance = 457.1156 GAMLSS-RS iteration 1: Global Deviance = 479.2384 GAMLSS-RS iteration 2: Global Deviance = 479.0957 GAMLSS-RS iteration 3: Global Deviance = 479.0947 GAMLSS-RS iteration 4: Global Deviance = 479.0945 GAMLSS-RS iteration 1: Global Deviance = 460.2527 GAMLSS-RS iteration 2: Global Deviance = 459.9957 GAMLSS-RS iteration 3: Global Deviance = 459.9956 GAMLSS-RS iteration 1: Global Deviance = 493.1947 GAMLSS-RS iteration 2: Global Deviance = 493.1239 GAMLSS-RS iteration 3: Global Deviance = 493.1239 GAMLSS-RS iteration 1: Global Deviance = 472.9667 GAMLSS-RS iteration 2: Global Deviance = 472.8189 GAMLSS-RS iteration 3: Global Deviance = 472.8185 GAMLSS-RS iteration 1: Global Deviance = 496.7255 GAMLSS-RS iteration 2: Global Deviance = 496.614 GAMLSS-RS iteration 3: Global Deviance = 496.6138 GAMLSS-RS iteration 1: Global Deviance = 465.6243 GAMLSS-RS iteration 2: Global Deviance = 465.4913 GAMLSS-RS iteration 3: Global Deviance = 465.4918 GAMLSS-RS iteration 1: Global Deviance = 513.284 GAMLSS-RS iteration 2: Global Deviance = 513.2346 GAMLSS-RS iteration 3: Global Deviance = 513.2344 GAMLSS-RS iteration 1: Global Deviance = 485.2545 GAMLSS-RS iteration 1: Global Deviance = 475.3673 GAMLSS-RS iteration 2: Global Deviance = 485.1126 GAMLSS-RS iteration 3: Global Deviance = 485.1125 GAMLSS-RS iteration 2: Global Deviance = 475.1128 GAMLSS-RS iteration 3: Global Deviance = 475.1125 GAMLSS-RS iteration 1: Global Deviance = 511.5959 GAMLSS-RS iteration 2: Global Deviance = 511.5465 GAMLSS-RS iteration 3: Global Deviance = 511.5464 GAMLSS-RS iteration 1: Global Deviance = 478.9438 GAMLSS-RS iteration 2: Global Deviance = 478.841 GAMLSS-RS iteration 3: Global Deviance = 478.8409 GAMLSS-RS iteration 1: Global Deviance = 494.9045 GAMLSS-RS iteration 2: Global Deviance = 494.8371 GAMLSS-RS iteration 3: Global Deviance = 494.8371 GAMLSS-RS iteration 1: Global Deviance = 496.1527 GAMLSS-RS iteration 2: Global Deviance = 496.0773 GAMLSS-RS iteration 3: Global Deviance = 496.0772 GAMLSS-RS iteration 1: Global Deviance = 476.3945 GAMLSS-RS iteration 2: Global Deviance = 476.1995 GAMLSS-RS iteration 3: Global Deviance = 476.1992 GAMLSS-RS iteration 1: Global Deviance = 508.766 GAMLSS-RS iteration 2: Global Deviance = 508.6698 GAMLSS-RS iteration 3: Global Deviance = 508.6696 GAMLSS-RS iteration 1: Global Deviance = 520.3606 GAMLSS-RS iteration 2: Global Deviance = 520.3468 GAMLSS-RS iteration 3: Global Deviance = 520.3467 GAMLSS-RS iteration 1: Global Deviance = 493.1393 GAMLSS-RS iteration 2: Global Deviance = 493.0679 GAMLSS-RS iteration 3: Global Deviance = 493.0678 GAMLSS-RS iteration 1: Global Deviance = 473.2153 GAMLSS-RS iteration GAMLSS-RS iteration 21: Global Deviance = : Global Deviance = 472.983469.6514 GAMLSS-RS iteration 2: Global Deviance = 469.4628 GAMLSS-RS iteration 3: Global Deviance = 469.4627 GAMLSS-RS iteration 3: Global Deviance = 472.9827 GAMLSS-RS iteration 1: Global Deviance = 480.7225 GAMLSS-RS iteration 2: Global Deviance = 480.5523 GAMLSS-RS iteration 3: Global Deviance = 480.5521 GAMLSS-RS iteration 1: Global Deviance = 447.7042 GAMLSS-RS iteration 2: Global Deviance = 447.4938 GAMLSS-RS iteration 3: Global Deviance = 447.4893 GAMLSS-RS iteration 4: Global Deviance = 447.4871 GAMLSS-RS iteration 5: Global Deviance = 447.4857 GAMLSS-RS iteration 6: Global Deviance = 447.4851 GAMLSS-RS iteration 1: Global Deviance = 462.479 GAMLSS-RS iteration 2: Global Deviance = 462.2758 GAMLSS-RS iteration 3: Global Deviance = 462.2756 GAMLSS-RS iteration 1: Global Deviance = 506.0749 GAMLSS-RS iteration 2: Global Deviance = 505.978 GAMLSS-RS iteration 1: Global Deviance = 483.9474 GAMLSS-RS iteration 3: Global Deviance = 505.9778 GAMLSS-RS iteration 2: Global Deviance = 483.817 GAMLSS-RS iteration 3: Global Deviance = 483.8169 GAMLSS-RS iteration 1: Global Deviance = 482.5142 GAMLSS-RS iteration 2: Global Deviance = 482.3873 GAMLSS-RS iteration 3: Global Deviance = 482.3872 GAMLSS-RS iteration 1: Global Deviance = 484.717 GAMLSS-RS iteration 2: Global Deviance = 484.5923 GAMLSS-RS iteration 3: Global Deviance = 484.5922 GAMLSS-RS iteration 1: Global Deviance = 485.8083 GAMLSS-RS iteration 2: Global Deviance = 485.5915 GAMLSS-RS iteration 3: Global Deviance = 485.591 GAMLSS-RS iteration 1: Global Deviance = 469.5803 GAMLSS-RS iteration 2: Global Deviance = 469.4327 GAMLSS-RS iteration 3: Global Deviance = 469.4326 GAMLSS-RS iteration 1: Global Deviance = 484.0694 GAMLSS-RS iteration 2: Global Deviance = 484.0094 GAMLSS-RS iteration 3: Global Deviance = 484.009 GAMLSS-RS iteration 1: Global Deviance = 479.9599 GAMLSS-RS iteration 2: Global Deviance = 479.8253 GAMLSS-RS iteration 3: Global Deviance = 479.8253 GAMLSS-RS iteration 1: Global Deviance = 488.6206 GAMLSS-RS iteration 2: Global Deviance = 488.5543 GAMLSS-RS iteration 3: Global Deviance = 488.5543 GAMLSS-RS iteration 1: Global Deviance = 501.5433 GAMLSS-RS iteration 2: Global Deviance = 501.4219 GAMLSS-RS iteration 3: Global Deviance = 501.4218 GAMLSS-RS iteration 1: Global Deviance = 501.4354 GAMLSS-RS iteration 2: Global Deviance = 501.362 GAMLSS-RS iteration 3: Global Deviance = 501.3619 GAMLSS-RS iteration 1: Global Deviance = 490.0919 GAMLSS-RS iteration 1: Global Deviance = 481.3438 GAMLSS-RS iteration 2: Global Deviance = 489.9032 GAMLSS-RS iteration 2: Global Deviance = 481.2277 GAMLSS-RS iteration 3: Global Deviance = 489.9026 GAMLSS-RS iteration 3: Global Deviance = 481.2276 GAMLSS-RS iteration 1: Global Deviance = 464.3072 GAMLSS-RS iteration 2: Global Deviance = 463.9761 GAMLSS-RS iteration 3: Global Deviance = 463.9755 GAMLSS-RS iteration 1: Global Deviance = 470.1414 GAMLSS-RS iteration 2: Global Deviance = 470.0177 GAMLSS-RS iteration 3: Global Deviance = 470.0176 GAMLSS-RS iteration 1: Global Deviance = 493.1311 GAMLSS-RS iteration 2: Global Deviance = 493.0035 GAMLSS-RS iteration 3: Global Deviance = 493.0034 GAMLSS-RS iteration 1: Global Deviance = 444.4399 GAMLSS-RS iteration 2: Global Deviance = 444.2724 GAMLSS-RS iteration 3: Global Deviance = 444.2721 GAMLSS-RS iteration 1: Global Deviance = 491.7116 GAMLSS-RS iteration 2: Global Deviance = 491.5306 GAMLSS-RS iteration 3: Global Deviance = 491.5304 GAMLSS-RS iteration 1: Global Deviance = 505.9553 GAMLSS-RS iteration 2: Global Deviance = 505.887 GAMLSS-RS iteration 3: Global Deviance = 505.8869 GAMLSS-RS iteration 1: Global Deviance = 507.1079 GAMLSS-RS iteration 2: Global Deviance = 507.05 GAMLSS-RS iteration 1: Global Deviance = 506.1419 GAMLSS-RS iteration 3: Global Deviance = 507.0498 GAMLSS-RS iteration 2: Global Deviance = 506.0919 GAMLSS-RS iteration 3: Global Deviance = 506.0917 GAMLSS-RS iteration 1: Global Deviance = 463.46 GAMLSS-RS iteration 2: Global Deviance = 463.3454 GAMLSS-RS iteration 3: Global Deviance = 463.3452 GAMLSS-RS iteration 1: Global Deviance = 472.2998 GAMLSS-RS iteration 1: Global Deviance = 487.9318 GAMLSS-RS iteration 2: Global Deviance = 487.8588 GAMLSS-RS iteration 3: Global Deviance = 487.8588 GAMLSS-RS iteration 2: Global Deviance = 472.1841 GAMLSS-RS iteration 3: Global Deviance = 472.1841 GAMLSS-RS iteration 1: Global Deviance = 468.8831 GAMLSS-RS iteration 2: Global Deviance = 468.7797 GAMLSS-RS iteration 3: Global Deviance = 468.7795 GAMLSS-RS iteration 1: Global Deviance = 477.2068 GAMLSS-RS iteration 1: Global Deviance = 508.8053 GAMLSS-RS iteration 2: Global Deviance = 477.1141 GAMLSS-RS iteration 3: Global Deviance = 477.114 GAMLSS-RS iteration 2: Global Deviance = 508.7725 GAMLSS-RS iteration 3: Global Deviance = 508.7725 GAMLSS-RS iteration 1: Global Deviance = 478.6358 GAMLSS-RS iteration 2: Global Deviance = 478.5031 GAMLSS-RS iteration 3: Global Deviance = 478.5029 GAMLSS-RS iteration 1: Global Deviance = 476.6766 GAMLSS-RS iteration 1: Global Deviance = 475.745 GAMLSS-RS iteration 2: Global Deviance = 475.6388 GAMLSS-RS iteration 2: Global Deviance = 476.5788 GAMLSS-RS iteration 3: Global Deviance = 475.6387 GAMLSS-RS iteration 3: Global Deviance = 476.5786 GAMLSS-RS iteration 1: Global Deviance = 475.6369 GAMLSS-RS iteration 2: Global Deviance = 475.454 GAMLSS-RS iteration 3: Global Deviance = 475.4537 GAMLSS-RS iteration 1: Global Deviance = 464.92 GAMLSS-RS iteration 2: Global Deviance = 464.7207 GAMLSS-RS iteration 3: Global Deviance = 464.7206 GAMLSS-RS iteration 1: Global Deviance = 485.8426 GAMLSS-RS iteration 2: Global Deviance = 485.6779 GAMLSS-RS iteration 3: Global Deviance = 485.6777 GAMLSS-RS iteration 1: Global Deviance = 458.996 GAMLSS-RS iteration 1: Global Deviance = 481.6602 GAMLSS-RS iteration 2: Global Deviance = 481.5627 GAMLSS-RS iteration 2: Global Deviance = 458.7934 GAMLSS-RS iteration 3: Global Deviance = 481.5626 GAMLSS-RS iteration 3: Global Deviance = 458.7931 GAMLSS-RS iteration 1: Global Deviance = 473.2521 GAMLSS-RS iteration 2: Global Deviance = 472.9942 GAMLSS-RS iteration 3: Global Deviance = 472.9938 GAMLSS-RS iteration 1: Global Deviance = 504.5335 GAMLSS-RS iteration 1: Global Deviance = 480.0429 GAMLSS-RS iteration 2: Global Deviance = 479.9328 GAMLSS-RS iteration 2: Global Deviance = 504.4467 GAMLSS-RS iteration 3: Global Deviance = 479.9326 GAMLSS-RS iteration 3: Global Deviance = 504.4466 GAMLSS-RS iteration 1: Global Deviance = 469.9592 GAMLSS-RS iteration 2: Global Deviance = 469.8477 GAMLSS-RS iteration 3: Global Deviance = 469.8475 GAMLSS-RS iteration 1: Global Deviance = 498.5388 GAMLSS-RS iteration 2: Global Deviance = 498.4949 GAMLSS-RS iteration 3: Global Deviance = 498.4948 GAMLSS-RS iteration 1: Global Deviance = 506.9985 GAMLSS-RS iteration 2: Global Deviance = 506.8775 GAMLSS-RS iteration 3: Global Deviance = 506.8773 GAMLSS-RS iteration 1: Global Deviance = 466.4795 GAMLSS-RS iteration 2: Global Deviance = 466.3568 GAMLSS-RS iteration 3: Global Deviance = 466.3568 GAMLSS-RS iteration 1: Global Deviance = 489.5309 GAMLSS-RS iteration 2: Global Deviance = 489.4309 GAMLSS-RS iteration 3: Global Deviance = 489.4307 GAMLSS-RS iteration 1: Global Deviance = 468.8029 GAMLSS-RS iteration 2: Global Deviance = 468.5853 GAMLSS-RS iteration 3: Global Deviance = 468.585 GAMLSS-RS iteration 1: Global Deviance = 474.612 GAMLSS-RS iteration 2: Global Deviance = 474.428 GAMLSS-RS iteration 3: Global Deviance = 474.4277 GAMLSS-RS iteration 1: Global Deviance = 478.8033 GAMLSS-RS iteration 1: Global Deviance = 472.4494 GAMLSS-RS iteration 2: Global Deviance = 478.7429 GAMLSS-RS iteration 3: Global Deviance = 478.7428 GAMLSS-RS iteration 2: Global Deviance = 472.3554 GAMLSS-RS iteration 3: Global Deviance = 472.3553 GAMLSS-RS iteration 1: Global Deviance = 447.3971 GAMLSS-RS iteration 2: Global Deviance = 447.2561 GAMLSS-RS iteration 1: Global Deviance = 511.9642 GAMLSS-RS iteration 3: Global Deviance = 447.2557 GAMLSS-RS iteration 2: Global Deviance = 511.9001 GAMLSS-RS iteration 3: Global Deviance = 511.9 GAMLSS-RS iteration 1: Global Deviance = 480.6848 GAMLSS-RS iteration 2: Global Deviance = 480.6207 GAMLSS-RS iteration 3: Global Deviance = 480.6206 GAMLSS-RS iteration 1: Global Deviance = 503.41 GAMLSS-RS iteration 2: Global Deviance = 503.3841 GAMLSS-RS iteration 3: Global Deviance = 503.3838 GAMLSS-RS iteration 1: Global Deviance = 490.6467 GAMLSS-RS iteration 2: Global Deviance = 490.5415 GAMLSS-RS iteration 3: Global Deviance = 490.5403 GAMLSS-RS iteration 4: Global Deviance = 490.5404 GAMLSS-RS iteration 1: Global Deviance = 480.2757 GAMLSS-RS iteration 2: Global Deviance = 480.1611 GAMLSS-RS iteration 3: Global Deviance = 480.1609 GAMLSS-RS iteration 1: Global Deviance = 483.1363 GAMLSS-RS iteration 2: Global Deviance = 483.0238 GAMLSS-RS iteration 3: Global Deviance = 483.0237 GAMLSS-RS iteration 1: Global Deviance = 497.6138 GAMLSS-RS iteration 2: Global Deviance = 497.5326 GAMLSS-RS iteration 3: Global Deviance = 497.5326 GAMLSS-RS iteration 1: Global Deviance = 487.6205 GAMLSS-RS iteration 2: Global Deviance = 487.4813 GAMLSS-RS iteration 3: Global Deviance = 487.4812 GAMLSS-RS iteration 1: Global Deviance = 490.2578 GAMLSS-RS iteration 2: Global Deviance = 490.1996 GAMLSS-RS iteration 3: Global Deviance = 490.1995 GAMLSS-RS iteration 1: Global Deviance = 491.5202 GAMLSS-RS iteration 2: Global Deviance = 491.3904 GAMLSS-RS iteration 3: Global Deviance = 491.3903 GAMLSS-RS iteration 1: Global Deviance = 488.5687 GAMLSS-RS iteration 2: Global Deviance = 488.5115 GAMLSS-RS iteration 3: Global Deviance = 488.5114 GAMLSS-RS iteration 1: Global Deviance = 497.4969 GAMLSS-RS iteration 2: Global Deviance = 497.44 GAMLSS-RS iteration 3: Global Deviance = 497.4398 GAMLSS-RS iteration 1: Global Deviance = 487.4554 GAMLSS-RS iteration 2: Global Deviance = 487.2303 GAMLSS-RS iteration 3: Global Deviance = 487.23 > stopImplicitCluster() > summary(B2) Coefficients from nonparam.boot() taken from: 100 simulations Error in xm[, cs.ind, drop = FALSE] : subscript out of bounds Calls: summary -> summary.NonParametric.Boot -> printCoefmat Execution halted Flavor: r-release-linux-x86_64