CRAN Package Check Results for Package easyDifferentialGeneCoexpression

Last updated on 2025-02-04 05:50:17 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.4 43.37 357.88 401.25 ERROR
r-devel-linux-x86_64-debian-gcc 1.4 31.85 262.47 294.32 ERROR
r-devel-linux-x86_64-fedora-clang 1.4 635.59 ERROR
r-devel-linux-x86_64-fedora-gcc 1.4 553.01 ERROR
r-devel-windows-x86_64 1.4 44.00 292.00 336.00 ERROR
r-patched-linux-x86_64 1.4 38.82 328.15 366.97 OK
r-release-linux-x86_64 1.4 38.51 325.15 363.66 ERROR
r-release-macos-arm64 1.4 179.00 OK
r-release-macos-x86_64 1.4 256.00 OK
r-release-windows-x86_64 1.4 42.00 287.00 329.00 ERROR
r-oldrel-macos-arm64 1.4 168.00 OK
r-oldrel-macos-x86_64 1.4 345.00 OK
r-oldrel-windows-x86_64 1.4 55.00 388.00 443.00 OK

Check Details

Version: 1.4
Check: examples
Result: ERROR Running examples in ‘easyDifferentialGeneCoexpression-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: easyDifferentialGeneCoexpression > ### Title: Function that computes the differential coexpression of a list > ### of probesets in a specific dataset and returns the most significant > ### pairs > ### Aliases: easyDifferentialGeneCoexpression > > ### ** Examples > > > probesetList <- c("200738_s_at", "217356_s_at", "206686_at") > verboseFlag <- "TRUE" > batchCorrection <- "TRUE" > signDiffCoexpressGenePairs <- easyDifferentialGeneCoexpression(probesetList, + "GSE3268", "description", "Normal", "Tumor", verboseFlag) Processed URL: https://ftp.ncbi.nlm.nih.gov/geo/series/GSE3nnn/GSE3268 Found 1 file(s) GSE3268_series_matrix.txt.gz Error in .Call(R_curl_fetch_memory, enc2utf8(url), handle, nonblocking) : reached elapsed time limit Execution halted Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-release-linux-x86_64

Version: 1.4
Check: examples
Result: ERROR Running examples in ‘easyDifferentialGeneCoexpression-Ex.R’ failed The error most likely occurred in: > ### Name: easyDifferentialGeneCoexpression > ### Title: Function that computes the differential coexpression of a list > ### of probesets in a specific dataset and returns the most significant > ### pairs > ### Aliases: easyDifferentialGeneCoexpression > > ### ** Examples > > > probesetList <- c("200738_s_at", "217356_s_at", "206686_at") > verboseFlag <- "TRUE" > batchCorrection <- "TRUE" > signDiffCoexpressGenePairs <- easyDifferentialGeneCoexpression(probesetList, + "GSE3268", "description", "Normal", "Tumor", verboseFlag) Processed URL: https://ftp.ncbi.nlm.nih.gov/geo/series/GSE3nnn/GSE3268 Found 1 file(s) GSE3268_series_matrix.txt.gz Error in .Call(R_curl_fetch_memory, enc2utf8(url), handle, nonblocking) : reached elapsed time limit Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.4
Check: examples
Result: ERROR Running examples in 'easyDifferentialGeneCoexpression-Ex.R' failed The error most likely occurred in: > ### Name: easyDifferentialGeneCoexpression > ### Title: Function that computes the differential coexpression of a list > ### of probesets in a specific dataset and returns the most significant > ### pairs > ### Aliases: easyDifferentialGeneCoexpression > > ### ** Examples > > > probesetList <- c("200738_s_at", "217356_s_at", "206686_at") > verboseFlag <- "TRUE" > batchCorrection <- "TRUE" > signDiffCoexpressGenePairs <- easyDifferentialGeneCoexpression(probesetList, + "GSE3268", "description", "Normal", "Tumor", verboseFlag) Processed URL: https://ftp.ncbi.nlm.nih.gov/geo/series/GSE3nnn/GSE3268 Found 1 file(s) GSE3268_series_matrix.txt.gz Error in .Call(R_download_curl, url, tmp, quiet, mode, handle, nonblocking) : reached elapsed time limit Execution halted Flavors: r-devel-windows-x86_64, r-release-windows-x86_64