Last updated on 2024-11-22 03:52:47 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.3.1 | 50.23 | 375.16 | 425.39 | WARN | |
| r-devel-linux-x86_64-debian-gcc | 1.1.3.1 | 34.19 | 294.51 | 328.70 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 1.1.3.1 | 745.43 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.3.1 | 737.85 | OK | |||
| r-devel-windows-x86_64 | 1.1.3.1 | 47.00 | 318.00 | 365.00 | NOTE | |
| r-patched-linux-x86_64 | 1.1.3.1 | 56.33 | 370.49 | 426.82 | NOTE | |
| r-release-linux-x86_64 | 1.1.3.1 | 48.42 | 370.76 | 419.18 | NOTE | |
| r-release-macos-arm64 | 1.1.3.1 | 241.00 | NOTE | |||
| r-release-macos-x86_64 | 1.1.3.1 | 293.00 | WARN | |||
| r-release-windows-x86_64 | 1.1.3.1 | 54.00 | 434.00 | 488.00 | NOTE | |
| r-oldrel-macos-arm64 | 1.1.3.1 | 139.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 1.1.3.1 | 271.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 1.1.3.1 | 62.00 | 418.00 | 480.00 | NOTE |
Version: 1.1.3.1
Check: whether startup messages can be suppressed
Result: NOTE
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
It looks like this package (or a package it requires) has a startup
message which cannot be suppressed: see ?packageStartupMessage.
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.1.3.1
Check: dependencies in R code
Result: NOTE
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.1.3.1
Check: S3 generic/method consistency
Result: WARN
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
See section ‘Generic functions and methods’ in the ‘Writing R
Extensions’ manual.
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.1.3.1
Check: replacement functions
Result: WARN
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
The argument of a replacement function which corresponds to the right
hand side must be named ‘value’.
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.1.3.1
Check: foreign function calls
Result: NOTE
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
See chapter ‘System and foreign language interfaces’ in the ‘Writing R
Extensions’ manual.
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.1.3.1
Check: R code for possible problems
Result: NOTE
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.1.3.1
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
BiclustGUI.Rd: biclust, fabia, iBBiG, BicARE, superbiclust,
BcDiag-package
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Version: 1.1.3.1
Check: for missing documentation entries
Result: WARN
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
All user-level objects in a package should have documentation entries.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.1.3.1
Check: for code/documentation mismatches
Result: WARN
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.1.3.1
Check: Rd \usage sections
Result: NOTE
Authorization required, but no authorization protocol specified
Authorization required, but no authorization protocol specified
The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.1.3.1
Check: package dependencies
Result: NOTE
Depends: includes the non-default packages:
'biclust', 'fabia', 'iBBiG', 'superbiclust', 'BcDiag', 'BicARE',
's4vd', 'BiBitR'
Adding so many packages to the search path is excessive and importing
selectively is preferable.
Flavors: r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64
Version: 1.1.3.1
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘GuideBiclustGUI.Rnw’ using knitr
Error: processing vignette 'GuideBiclustGUI.Rnw' failed with diagnostics:
Running 'texi2dvi' on 'GuideBiclustGUI.tex' failed.
LaTeX errors:
! Undefined control sequence.
l.2365 \hldef
{newmethod_WINDOW} \hlkwb{<-} \hlkwa{function}\hldef{()\{}
?
! Emergency stop.
! Emergency stop.
l.2365
End of file on the terminal!
! ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘GuideBiclustGUI.Rnw’
SUMMARY: processing the following file failed:
‘GuideBiclustGUI.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.3.1
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘rqubic’
Depends: includes the non-default packages:
'biclust', 'fabia', 'iBBiG', 'superbiclust', 'BcDiag', 'BicARE',
's4vd', 'BiBitR'
Adding so many packages to the search path is excessive and importing
selectively is preferable.
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64