Last updated on 2024-09-27 04:50:14 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.1.6 | 17.35 | 321.47 | 338.82 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.1.6 | 14.17 | 268.84 | 283.01 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.1.6 | 532.35 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 2.1.6 | 525.62 | OK | |||
| r-devel-windows-x86_64 | 2.1.6 | 21.00 | 572.00 | 593.00 | OK | |
| r-patched-linux-x86_64 | 2.1.6 | 16.74 | 306.81 | 323.55 | OK | |
| r-release-linux-x86_64 | 2.1.6 | 16.25 | 308.58 | 324.83 | OK | |
| r-release-macos-arm64 | 2.1.6 | 81.00 | ERROR | |||
| r-release-macos-x86_64 | 2.1.6 | 132.00 | ERROR | |||
| r-release-windows-x86_64 | 2.1.6 | 20.00 | 582.00 | 602.00 | OK | |
| r-oldrel-macos-arm64 | 2.1.6 | 87.00 | ERROR | |||
| r-oldrel-macos-x86_64 | 2.1.6 | 150.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 2.1.6 | 27.00 | 658.00 | 685.00 | NOTE |
Version: 2.1.6
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking:
'BSgenome.Hsapiens.UCSC.hg38', 'BSgenome.Hsapiens.UCSC.hg19',
'BSgenome.Mmusculus.UCSC.mm10'
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 2.1.6
Check: examples
Result: ERROR
Running examples in ‘MicroSEC-Ex.R’ failed
The error most likely occurred in:
> ### Name: fun_load_genome
> ### Title: Genome loading function.
> ### Aliases: fun_load_genome
>
> ### ** Examples
>
> fun_load_genome("Human")
Error: Install BSgenome.Hsapiens.UCSC.hg38 package.
Execution halted
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 2.1.6
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘my-vignette.Rmd’ using rmarkdown
Quitting from lines 125-195 [analysis] (my-vignette.Rmd)
Error: processing vignette 'my-vignette.Rmd' failed with diagnostics:
there is no package called 'BSgenome.Hsapiens.UCSC.hg38'
--- failed re-building ‘my-vignette.Rmd’
SUMMARY: processing the following file failed:
‘my-vignette.Rmd’
Execution halted
Flavors: r-release-macos-arm64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 2.1.6
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
Error in readRDS(file) : error reading from connection
--- re-building ‘my-vignette.Rmd’ using rmarkdown
Quitting from lines 125-195 [analysis] (my-vignette.Rmd)
Error: processing vignette 'my-vignette.Rmd' failed with diagnostics:
there is no package called 'BSgenome.Hsapiens.UCSC.hg38'
--- failed re-building ‘my-vignette.Rmd’
SUMMARY: processing the following file failed:
‘my-vignette.Rmd’
Execution halted
Flavor: r-release-macos-x86_64
Version: 2.1.6
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: 'BSgenome.Mmusculus.UCSC.mm10'
Flavor: r-oldrel-windows-x86_64