Last updated on 2025-02-10 03:49:16 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.8.2 | 7.76 | 690.75 | 698.51 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 0.8.2 | 5.59 | 170.47 | 176.06 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.8.2 | 1113.90 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 0.8.2 | 1032.40 | NOTE | |||
| r-devel-windows-x86_64 | 0.8.2 | 10.00 | 409.00 | 419.00 | NOTE | |
| r-patched-linux-x86_64 | 0.8.2 | 9.44 | 642.80 | 652.24 | OK | |
| r-release-linux-x86_64 | 0.8.2 | 7.78 | 649.18 | 656.96 | OK | |
| r-release-macos-arm64 | 0.8.2 | 168.00 | NOTE | |||
| r-release-macos-x86_64 | 0.8.2 | 227.00 | NOTE | |||
| r-release-windows-x86_64 | 0.8.2 | 10.00 | 408.00 | 418.00 | NOTE | |
| r-oldrel-macos-arm64 | 0.8.2 | 219.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 0.8.2 | 413.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 0.8.2 | 12.00 | 557.00 | 569.00 | NOTE |
Version: 0.8.2
Check: DESCRIPTION meta-information
Result: NOTE
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘addDrugUtilisation.R’ ‘addIntersect.R’ ‘benchmarkDrugUtilisation.R’
‘cohortUtilities.R’ ‘dailyDose.R’ ‘erafyCohort.R’
‘generateDrugUtilisationCohortSet.R’ ‘generateIngredientCohortSet.R’
‘mockDrugUtilisation.R’ ‘pattern.R’ ‘plots.R’ ‘require.R’
‘summariseDrugRestart.R’ ‘summariseDrugUtilisation.R’
‘summariseIntersect.R’ ‘summariseProportionOfPatientsCovered.R’
‘tables.R’ ‘validate.R’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64
Version: 0.8.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [4s/25s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(DrugUtilisation)
>
> test_check("DrugUtilisation")
Starting 2 test processes
Error in `private$handle_error()`:
! testthat subprocess failed to start, stderr:
ℹ `EUNOMIA_DATA_FOLDER` set to: '/tmp/RtmpjNCxhw'.
trying URL 'https://example-data.ohdsi.dev/GiBleed.zip'
Error in `FUN()`:
! In path: "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/DrugUtilisation.Rcheck/tests/testthat/setup.R"
Caused by error in `utils::download.file()`:
! cannot open URL 'https://example-data.ohdsi.dev/GiBleed.zip'
Backtrace:
▆
1. ├─global callr_startup_hook()
2. │ └─asNamespace("testthat")$queue_process_setup(...)
3. │ └─asNamespace("testthat")$test_files_setup_state(...)
4. │ └─testthat::source_test_setup(".", env)
5. │ └─testthat::source_dir(path, "^setup.*\\.[rR]$", env = env, wrap = FALSE)
6. │ └─base::lapply(...)
7. │ └─testthat (local) FUN(X[[i]], ...)
8. │ └─testthat::source_file(path, env = env, chdir = chdir, wrap = wrap)
9. │ ├─base::withCallingHandlers(...)
10. │ └─base::eval(exprs, env)
11. │ └─base::eval(exprs, env)
12. │ └─CDMConnector::requireEunomia() at tests/testthat/setup.R:1:1
13. │ └─CDMConnector::downloadEunomiaData(...)
14. │ ├─withr::with_options(...)
15. │ │ └─base::force(code)
16. │ └─utils::download.file(...)
17. └─base::.handleSimpleError(...)
18. └─testthat (local) h(simpleError(msg, call))
19. └─rlang::abort(...)
Warning message:
In utils::download.file(url = url, destfile = file.path(pathToData, :
URL 'https://example-data.ohdsi.dev/GiBleed.zip': status was 'Could not resolve hostname'
Ran 4/4 deferred expressions
Error in deferred_run(env) : could not find function "deferred_run"
Calls: <Anonymous>
Caused by error:
! R session crashed with exit code 1
Backtrace:
▆
1. └─testthat::test_check("DrugUtilisation")
2. └─testthat::test_dir(...)
3. └─testthat:::test_files(...)
4. └─testthat:::test_files_parallel(...)
5. ├─withr::with_dir(...)
6. │ └─base::force(code)
7. ├─testthat::with_reporter(...)
8. │ └─base::tryCatch(...)
9. │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
10. │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
11. │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
12. └─testthat:::parallel_event_loop_chunky(queue, reporters, ".")
13. └─queue$poll(Inf)
14. └─base::lapply(...)
15. └─testthat (local) FUN(X[[i]], ...)
16. └─private$handle_error(msg, i)
17. └─rlang::abort(...)
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.8.2
Check: installed package size
Result: NOTE
installed size is 5.7Mb
sub-directories of 1Mb or more:
doc 4.9Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64